Flyway / Picocli native build fail with ClassNotFoundException org.jboss.vfs.VirtualFileFilter

[fano-mipih]

Describe the bug

I try to build a native executable for a Quarkus project using Picocli and Flyway quarkus extensions.
The native build fail with the following exceptions :

Fatal error: java.lang.NoClassDefFoundError: software/amazon/awssdk/awscore/exception/AwsServiceException
        at java.base/java.lang.Class.getDeclaredFields0(Native Method)
        at java.base/java.lang.Class.privateGetDeclaredFields(Class.java:2930)
        at java.base/java.lang.Class.getDeclaredFields(Class.java:2249)
        at org.graalvm.nativeimage.builder/com.oracle.svm.hosted.reflect.ReflectionDataBuilder.lambda$registerAllDeclaredFieldsQuery$0(ReflectionDataBuilder.java:555)
        at org.graalvm.nativeimage.builder/com.oracle.svm.hosted.reflect.ReflectionDataBuilder.lambda$runConditionalInAnalysisTask$1(ReflectionDataBuilder.java:184)
        at org.graalvm.nativeimage.pointsto/com.oracle.graal.pointsto.util.CompletionExecutor.executeCommand(CompletionExecutor.java:166)
        at org.graalvm.nativeimage.pointsto/com.oracle.graal.pointsto.util.CompletionExecutor.lambda$executeService$0(CompletionExecutor.java:152)
        at java.base/java.util.concurrent.ForkJoinTask$RunnableExecuteAction.compute(ForkJoinTask.java:1735)
        at java.base/java.util.concurrent.ForkJoinTask$RunnableExecuteAction.compute(ForkJoinTask.java:1726)
        at java.base/java.util.concurrent.ForkJoinTask$InterruptibleTask.exec(ForkJoinTask.java:1650)
        at java.base/java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:507)
        at java.base/java.util.concurrent.ForkJoinPool.externalHelpQuiesce(ForkJoinPool.java:2458)
        at java.base/java.util.concurrent.ForkJoinPool.helpQuiescePool(ForkJoinPool.java:2492)
        at java.base/java.util.concurrent.ForkJoinPool.awaitQuiescence(ForkJoinPool.java:3740)
        at org.graalvm.nativeimage.pointsto/com.oracle.graal.pointsto.util.CompletionExecutor.complete(CompletionExecutor.java:208)
        at org.graalvm.nativeimage.pointsto/com.oracle.graal.pointsto.PointsToAnalysis.doTypeflow(PointsToAnalysis.java:640)
        at org.graalvm.nativeimage.pointsto/com.oracle.graal.pointsto.PointsToAnalysis.finish(PointsToAnalysis.java:627)
        at org.graalvm.nativeimage.pointsto/com.oracle.graal.pointsto.AbstractAnalysisEngine.runAnalysis(AbstractAnalysisEngine.java:160)
        at org.graalvm.nativeimage.builder/com.oracle.svm.hosted.NativeImageGenerator.runPointsToAnalysis(NativeImageGenerator.java:821)
        at org.graalvm.nativeimage.builder/com.oracle.svm.hosted.NativeImageGenerator.doRun(NativeImageGenerator.java:567)
        at org.graalvm.nativeimage.builder/com.oracle.svm.hosted.NativeImageGenerator.run(NativeImageGenerator.java:533)
        at org.graalvm.nativeimage.builder/com.oracle.svm.hosted.NativeImageGeneratorRunner.buildImage(NativeImageGeneratorRunner.java:545)
        at org.graalvm.nativeimage.builder/com.oracle.svm.hosted.NativeImageGeneratorRunner.build(NativeImageGeneratorRunner.java:732)
        at org.graalvm.nativeimage.builder/com.oracle.svm.hosted.NativeImageGeneratorRunner.start(NativeImageGeneratorRunner.java:151)
        at org.graalvm.nativeimage.builder/com.oracle.svm.hosted.NativeImageGeneratorRunner.main(NativeImageGeneratorRunner.java:99)
Caused by: java.lang.ClassNotFoundException: software.amazon.awssdk.awscore.exception.AwsServiceException
        at java.base/jdk.internal.loader.BuiltinClassLoader.loadClass(BuiltinClassLoader.java:580)
        at java.base/java.lang.ClassLoader.loadClass(ClassLoader.java:490)
        at org.graalvm.nativeimage.builder/com.oracle.svm.hosted.NativeImageClassLoader.loadClass(NativeImageClassLoader.java:682)
        at java.base/java.lang.ClassLoader.loadClass(ClassLoader.java:490)
        ... 25 more
Fatal error: java.lang.NoClassDefFoundError: org/jboss/vfs/VirtualFileFilter
        at java.base/java.lang.Class.getDeclaredMethods0(Native Method)
        at java.base/java.lang.Class.privateGetDeclaredMethods(Class.java:3035)
        at java.base/java.lang.Class.getDeclaredMethods(Class.java:2331)
        at org.graalvm.nativeimage.builder/com.oracle.svm.hosted.reflect.ReflectionDataBuilder.lambda$registerAllDeclaredMethodsQuery$0(ReflectionDataBuilder.java:379)
        at org.graalvm.nativeimage.builder/com.oracle.svm.hosted.reflect.ReflectionDataBuilder.lambda$runConditionalInAnalysisTask$1(ReflectionDataBuilder.java:184)
        at org.graalvm.nativeimage.pointsto/com.oracle.graal.pointsto.util.CompletionExecutor.executeCommand(CompletionExecutor.java:166)
        at org.graalvm.nativeimage.pointsto/com.oracle.graal.pointsto.util.CompletionExecutor.lambda$executeService$0(CompletionExecutor.java:152)
        at java.base/java.util.concurrent.ForkJoinTask$RunnableExecuteAction.compute(ForkJoinTask.java:1735)
        at java.base/java.util.concurrent.ForkJoinTask$RunnableExecuteAction.compute(ForkJoinTask.java:1726)
        at java.base/java.util.concurrent.ForkJoinTask$InterruptibleTask.exec(ForkJoinTask.java:1650)
        at java.base/java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:507)
        at java.base/java.util.concurrent.ForkJoinPool$WorkQueue.topLevelExec(ForkJoinPool.java:1394)
        at java.base/java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1970)
        at java.base/java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:187)
Caused by: java.lang.ClassNotFoundException: org.jboss.vfs.VirtualFileFilter
        at java.base/jdk.internal.loader.BuiltinClassLoader.loadClass(BuiltinClassLoader.java:580)
        at java.base/java.lang.ClassLoader.loadClass(ClassLoader.java:490)
        at org.graalvm.nativeimage.builder/com.oracle.svm.hosted.NativeImageClassLoader.loadClass(NativeImageClassLoader.java:682)
        at java.base/java.lang.ClassLoader.loadClass(ClassLoader.java:490)
        ... 14 more

My project doesn't make use of Amazon S3 or Jboss VFS but native build try to load these classes.

I tried to add quarkus.native.additional-build-args=--initialize-at-run-time=org.flywaydb.core.internal.scanner.classpath.jboss.JBossVFSv3ClassPathLocationScanner\\,org.flywaydb.core.internal.resource.s3.AwsS3Resource option but with no success.

How could i tell the native builder to ignore these optional dependencies ?

Expected behavior

Native build must ignore these classes because VFS and S3 are not used in this project.

Actual behavior

Native build try to load VFS and S3 related classes.

How to Reproduce?

I've uploaded a sample projet to Github :
https://github.com/fano-mipih/dumpbo-test

Steps to reproduce :

1. Clone project : https://github.com/fano-mipih/dumpbo-test
2. Run a native build : mvn clean package -Pnative

Output of uname -a or ver

Linux vdi-407 4.4.0-19041-Microsoft #1237-Microsoft Sat Sep 11 14:32:00 PST 2021 x86_64 x86_64 x86_64 GNU/Linux

Output of java -version

openjdk version "24.0.1" 2025-04-15 OpenJDK Runtime Environment GraalVM CE 24.0.1+9.1 (build 24.0.1+9-jvmci-b01) OpenJDK 64-Bit Server VM GraalVM CE 24.0.1+9.1 (build 24.0.1+9-jvmci-b01, mixed mode, sharing)

Mandrel or GraalVM version (if different from Java)

No response

Quarkus version or git rev

3.22.3

Build tool (ie. output of mvnw --version or gradlew --version)

Apache Maven 3.9.9

Additional information

No response

[quarkus-bot]

/cc @Karm (native-image), @cristhiank (flyway), @ebullient (picocli), @galderz (native-image), @gastaldi (flyway), @geoand (flyway), @gsmet (flyway), @zakkak (native-image)

[geoand]

cc @alesj